CDS

Accession Number TCMCG057C59238
gbkey CDS
Protein Id XP_018465589.1
Location join(1460..1941,2214..2303,2396..2462,2548..2640,2748..2933,3015..3095,3178..3315,3407..>3532)
Gene LOC108837004
GeneID 108837004
Organism Raphanus sativus

Protein

Length 421aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018610087.1
Definition PREDICTED: sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic, partial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description omega-3 fatty acid desaturase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01004        [VIEW IN KEGG]
KEGG_ko ko:K10257        [VIEW IN KEGG]
EC 1.14.19.25        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.14.19.35        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.14.19.36        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006631        [VIEW IN EMBL-EBI]
GO:0006633        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0042170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAACTTGGTCTTATCCGAATGTGGCATAAGACCTCTCCCCAGAATCTACACCACACCCAGATCCACTTTCCTCTCTAACACCAACACCACCTTCAAACTCAGACCATCCCCTTCTTCTTCTTCCACTTCTCTCTCGTTTCGTCTGAATGGGCTCTCCACTAAGAACTGGGCGTTGAATGTAACCACACCTTTAACAGTCGAGTCGTCTCCTCCTCCAATCGAGGAGGAACACGAAACGCAGAGATTCGACCCAGGCGCGCCTCCTCCGTTCAACTTAGCTGATATCAGAGCAGCTATTCCCAAGCATTGTTGGGTCAAGAATCCATGGAAGTCCATGAGCTACGTTGCGAGAGACGTCGCCATTGTGTTTGCATTGGCTGCTGGAGCTGCTTACCTCAACAGTTGGCTTGTCTGGCCTCTCTATTGGCTTGCTCAAGGAACCATGTTCTGGGCTCTCTTTGTTCTTGGCCATGACTGTGGACATGGTAGCTTCTCAAATGATCCGAGGTTGAACAGTGTTGTTGGTCACCTTCTTCATTCCTCAATCCTAGTCCCTTACCATGGCTGGAGAATTAGCCACAGGACTCACCACCAGAACCATGGACATGTTGAGAACGATGAATCTTGGCATCCTATGTCTGAGAAAATATACAAGACTTTGGATAGACCCACTCGGTTCTTTAGGTTCACACTGCCTCTCGTGATGCTCGCGTACCCTTTCTACTTGTGGGCTCGAAGCCCGGGGAAAAAGGGTTCTCATTACCATCCGGACAGTGATTTGTTCCTCCCTAAAGAGAAGAAGGATGTTCTTACTTCTACAGCTTGTTGGACTGCAATGGCTGCTCTGCTTGTGTGTCTCAACTTTGTGATGGGTCCAATGCAAATGCTCAAACTCTATGGAATCCCTTACTGGATAAATGTAATGTGGTTGGACTTTGTGACTTACCTGCATCATCATGGTCATGAAGATAAGCTCCCTTGGTACCGTGGGAAGGAATGGAGTTACTTGAGAGGAGGGCTAACAACATTGGATCGTGACTACGGAGTGATCAACAACATCCACCACGACATCGGAACTCATGTGATACATCATCTTTTCCCGCAGATCCCACATTATCATCTCGTAGAAGCGACAGAAGCGGCTAAACCAGTATTAGGCAAGTATTACAGGGAGCCTGATAAGTCTGGACCTTTGCCATTACATTTACTGGGAATCTTAGCAAAAAGTATGAAAGAAGATCATTATGTGAGCGACCAA
Protein:  
MANLVLSECGIRPLPRIYTTPRSTFLSNTNTTFKLRPSPSSSSTSLSFRLNGLSTKNWALNVTTPLTVESSPPPIEEEHETQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSMSYVARDVAIVFALAAGAAYLNSWLVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYKTLDRPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPMQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSMKEDHYVSDQ